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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
40
DNA binding
4
Transcription
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
40
May, 2024
4
March, 2023
Available data
40
bed narrowPeak
40
bigWig
Organism
40
Homo sapiens
Biosample type
40
tissue
2
cell line
2
stem cell
Organ
40
heart
Project
40
AMP
4
community
Genome assembly (visualization)
40
GRCh38
Lab
3911
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
DNAme array
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
left cardiac atrium
40
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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