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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
5
total RNA-seq
3
WGBS
1
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
48
DNA binding
5
Transcription
4
DNA methylation
2
DNA accessibility
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
31
bam
28
fastq
23
bigWig
20
tagAlign
18
bed narrowPeak
6
bigBed narrowPeak
5
tsv
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
59
Homo sapiens
Biosample type
54
tissue
5
primary cell
Organ
188
pancreas
125
connective tissue
59
liver
57
adipose tissue
35
epithelium
26
musculature of body
3
kidney
Project
59
AMP
Genome assembly (visualization)
25
hg19
24
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
1
inconsistent control read length
assay_title!
DNAme array
month_released!
August, 2021
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
DNase-seq
RRBS
tissue
liver
48
3
1
right lobe of liver
1
1
primary cell
hepatocyte
5
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