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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
45
ATAC-seq
14
ChIP-seq
DNase-seq
2
single cell RNA-seq
Assay category
57
Transcription
45
DNA accessibility
14
DNA binding
Target of assay
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
6
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
77
bam
60
bigWig
57
tsv
50
bed narrowPeak
6
tagAlign
1
bigBed narrowPeak
Organism
116
Homo sapiens
Biosample type
66
cell line
49
tissue
1
primary cell
Organ
785
pancreas
683
liver
597
connective tissue
457
adipose tissue
epithelium
266
heart
242
kidney
159
bone element
153
vasculature
150
blood vessel
117
artery
68
blood
68
bodily fluid
66
brain
54
eye
37
limb
30
musculature of body
25
embryo
20
lung
18
spleen
17
nerve
16
skeleton
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
116
AMP
Genome assembly (visualization)
103
GRCh38
68
hg19
Lab
116
AMP-T2D consortium
assay_title!
DNase-seq
FAIRE-seq
organ_slims!
epithelium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
116 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
3
tibial artery
1
1
5
pulmonary artery
2
primary cell
smooth muscle cell of the coronary artery
1
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