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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
11
ATAC-seq
9
WGBS
3
single cell RNA-seq
2
RRBS
DNase-seq
Assay category
123
DNA binding
11
DNA accessibility
11
DNA methylation
3
Transcription
Target of assay
76
histone
76
histone modification
48
broad histone mark
47
control
28
narrow histone mark
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
134
August, 2017
125
November, 2017
95
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
8
June, 2019
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
September, 2018
Available data
47
tagAlign
32
fastq
30
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
Organism
147
Homo sapiens
Biosample type
117
tissue
19
in vitro differentiated cells
12
primary cell
Organ
61
connective tissue
42
adipose tissue
33
liver
29
pancreas
14
kidney
12
epithelium
11
musculature of body
Project
148
AMP
Genome assembly (visualization)
hg19
259
GRCh38
Lab
134
AMP-T2D consortium
14
Katalin Susztak, Upenn
assay_title!
DNase-seq
MPRA
assembly!
hg19
BIOSAMPLE
ASSAY
148 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
single cell RNA-seq
RRBS
tissue
subcutaneous abdominal adipose tissue
35
3
liver
30
3
islet of Langerhans
15
kidney
11
3
skeletal muscle tissue
9
2
+ See 2 more…
in vitro differentiated cells
adipocyte
19
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
See all biosamples
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