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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
snATAC-seq
1
ATAC-seq
Assay category
60
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
61
cell line
Organ
913
pancreas
725
liver
674
connective tissue
499
epithelium
488
adipose tissue
363
heart
265
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
61
blood
61
bodily fluid
57
eye
49
musculature of body
41
nerve
37
embryo
24
spleen
18
vein
16
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
61
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
DNase-seq
STARR-seq
snATAC-seq
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
ATAC-seq
cell line
GM12878
60
1
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