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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
DNase-seq
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
February, 2021
406
November, 2017
341
May, 2020
330
August, 2017
296
October, 2019
277
August, 2021
267
May, 2021
189
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
96
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
72
November, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
72
fastq
71
bam
64
bed narrowPeak
64
bigBed narrowPeak
64
bigWig
1
csv
Organism
72
Homo sapiens
Biosample type
60
cell line
11
tissue
1
primary cell
Organ
49
liver
15
blood
15
bodily fluid
6
spleen
1
pancreas
Project
72
AMP
Genome assembly (visualization)
63
GRCh38
62
hg19
Lab
72
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
DNase-seq
WGBS
biosample_type!
in vitro differentiated cells
month_released!
February, 2021
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
GM12878
15
tissue
spleen
6
liver
4
pancreas
1
primary cell
pancreatic cell
1
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