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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
ChIP-seq
DNase-seq
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
17
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
29
bed narrowPeak
5
tsv
3
bam
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
49
tissue
4
primary cell
Organ
755
liver
742
pancreas
664
connective tissue
487
adipose tissue
360
heart
344
epithelium
252
brain
224
kidney
224
vasculature
220
blood vessel
158
bone element
137
artery
86
limb
62
musculature of body
61
blood
61
bodily fluid
53
eye
41
nerve
34
embryo
23
spleen
20
vein
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
53
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
53
AMP-T2D consortium
assay_title!
DNase-seq
pCHi-C
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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