Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
ChIP-seq
DNase-seq
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
17
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
29
bed narrowPeak
5
tsv
3
bam
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
49
tissue
4
primary cell
Organ
937
pancreas
774
liver
670
connective tissue
505
epithelium
487
adipose tissue
360
heart
271
kidney
252
brain
224
vasculature
220
blood vessel
158
bone element
137
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
53
eye
41
nerve
37
embryo
23
spleen
20
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
53
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
53
AMP-T2D consortium
assay_title!
DNase-seq
pCHi-C
audit.WARNING.category!
inconsistent control run_type
organ_slims!
intestine
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
Download