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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
321
ChIP-seq
Assay category
321
DNA binding
Target of assay
321
histone
321
histone modification
174
narrow histone mark
147
broad histone mark
68
control
9
transcription factor
Date released
85
May, 2021
74
August, 2017
67
November, 2017
40
October, 2019
27
May, 2020
16
August, 2021
12
October, 2017
Available data
868
bigWig
850
bed narrowPeak
784
bam
391
bigBed narrowPeak
321
tagAlign
229
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
315
Homo sapiens
Biosample type
186
tissue
98
primary cell
26
in vitro differentiated cells
11
cell line
Organ
99
brain
58
liver
19
connective tissue
15
pancreas
13
musculature of body
7
adipose tissue
4
epithelium
1
pituitary gland
Project
237
AMP
84
T1D
Genome assembly (visualization)
237
GRCh38
227
hg19
Lab
237
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
assay_title!
DNase-seq
snATAC-seq
BIOSAMPLE
ASSAY
321 results
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ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
cell line
HepG2
11
See all biosamples
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