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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
WGBS
1
ATAC-seq
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
January, 2019
5
November, 2018
4
December, 2018
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
9
bigWig
7
bed narrowPeak
6
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
891
pancreas
631
connective tissue
471
adipose tissue
466
epithelium
440
liver
338
heart
237
kidney
173
vasculature
170
blood vessel
165
brain
159
bone element
108
artery
62
musculature of body
35
eye
34
embryo
21
limb
18
spleen
16
skeleton
10
blood
10
bodily fluid
10
lung
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
18
AMP
Genome assembly (visualization)
9
GRCh38
7
hg19
Lab
18
AMP-T2D consortium
assay_title!
DNase-seq
snATAC-seq
month_released!
October, 2019
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
14
2
1
1
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