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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
2
WGBS
1
pCHi-C
Assay category
21
DNA binding
9
Transcription
2
DNA methylation
Target of assay
18
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
11
May, 2019
10
October, 2019
6
August, 2021
3
February, 2020
2
July, 2019
1
March, 2020
Available data
bed narrowPeak
23
bam
10
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
33
Homo sapiens
Biosample type
28
tissue
5
primary cell
cell line
Organ
252
pancreas
178
epithelium
145
kidney
125
heart
94
connective tissue
94
liver
89
bone element
65
adipose tissue
60
brain
33
blood vessel
33
vasculature
27
eye
26
limb
23
musculature of body
20
lung
12
nerve
11
artery
11
spleen
8
blood
8
bodily fluid
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
33
AMP
Genome assembly (visualization)
hg19
7
GRCh38
Lab
33
AMP-T2D consortium
assay_title!
DNase-seq
assembly!
hg19
biosample_type!
cell line
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
WGBS
pCHi-C
tissue
aorta
2
4
2
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
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primary cell
endothelial cell of umbilical vein
5
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