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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
24
ChIP-seq
1
FAIRE-seq
Assay category
24
DNA binding
1
DNA accessibility
Target of assay
22
histone
22
histone modification
12
broad histone mark
10
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
18
April, 2019
4
May, 2019
2
June, 2019
1
July, 2019
Available data
104
bed narrowPeak
65
bam
64
xls
57
txt
52
bigWig
25
bigBed narrowPeak
17
tsv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
25
Homo sapiens
Biosample type
19
tissue
6
primary cell
Organ
353
liver
95
brain
72
vasculature
70
blood vessel
64
heart
59
epithelium
54
blood
54
bodily fluid
48
limb
43
pancreas
25
kidney
24
nerve
21
artery
14
connective tissue
14
musculature of body
12
spleen
11
vein
3
adipose tissue
2
eye
Project
25
AMP
Genome assembly (visualization)
25
hg19
24
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
DNase-seq
audit.ERROR.category!
audit script error
month_released!
October, 2018
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
FAIRE-seq
tissue
kidney
18
1
primary cell
kidney epithelial cell
4
epithelial cell of proximal tubule
2
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