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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
2321
bam
2165
bigWig
1317
bed narrowPeak
1087
tsv
778
fastq
750
bigBed narrowPeak
295
tagAlign
155
txt
102
bed broadPeak
79
bigBed broadPeak
64
xls
47
bed bed3+
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
15
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
assay_title!
DNase-seq
audit.ERROR.category!
inconsistent replicate
organ_slims!
pancreas
BIOSAMPLE
ASSAY
4 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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