Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
5
ChIP-seq
DNase-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
14
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
21
October, 2019
3
June, 2019
1
July, 2019
Available data
29
bed narrowPeak
tsv
3
bam
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
48
tissue
4
primary cell
Organ
611
liver
519
pancreas
349
epithelium
249
kidney
228
brain
197
connective tissue
195
heart
157
vasculature
153
blood vessel
101
bone element
88
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
54
musculature of body
52
eye
36
nerve
23
embryo
23
spleen
20
vein
19
lung
16
skeleton
4
gonad
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
52
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
52
AMP-T2D consortium
assay_title!
DNase-seq
audit.WARNING.category!
inconsistent assembly
files.file_type!
tsv
organ_slims!
ovary
BIOSAMPLE
ASSAY
52 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
3
1
Download