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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
44
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
1
other context
1
other post-translational modification
Date released
47
November, 2017
Available data
2591
bam
2351
bigWig
1323
bed narrowPeak
1323
tsv
936
fastq
747
bigBed narrowPeak
tagAlign
160
txt
82
bed broadPeak
64
xls
58
bed bed3+
58
bigBed broadPeak
23
bed bedMethyl
23
bigBed bedMethyl
17
bedpe bed3+
15
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
47
Homo sapiens
Biosample type
47
cell line
primary cell
Organ
47
liver
Project
47
AMP
Genome assembly (visualization)
47
hg19
35
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_title!
DNase-seq
biosample_type!
primary cell
files.file_type!
tagAlign
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
cell line
HepG2
47
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