Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
455
total RNA-seq
24
ChIP-seq
5
ATAC-seq
DNase-seq
2
small RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
457
Transcription
24
DNA binding
5
DNA accessibility
Target of assay
18
control
5
RNA binding protein
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
444
February, 2021
August, 2017
23
October, 2018
10
July, 2019
2
February, 2020
2
October, 2019
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
November, 2019
1
October, 2017
Available data
479
bam
462
bigWig
457
tsv
24
fastq
8
bed narrowPeak
6
bigBed narrowPeak
Organism
487
Homo sapiens
Biosample type
488
tissue
33
primary cell
29
in vitro differentiated cells
1
stem cell
Organ
488
connective tissue
429
adipose tissue
352
pancreas
304
liver
286
heart
238
brain
184
kidney
158
bone element
128
blood vessel
128
vasculature
86
limb
69
artery
53
eye
41
nerve
24
musculature of body
24
spleen
20
lung
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
488
AMP
Genome assembly (visualization)
465
hg19
462
GRCh38
Lab
488
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
DNase-seq
lab.title!
KPMP
month_released!
August, 2017
BIOSAMPLE
ASSAY
488 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
small RNA-seq
RNA microarray
pCHi-C
tissue
adipose tissue
382
3
1
bone tissue
58
subcutaneous adipose tissue
7
12
1
1
omental fat pad
5
11
1
1
visceral abdominal adipose tissue
3
+ See 2 more…
See all biosamples
Download