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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
DNase-seq
1
FAIRE-seq
Assay category
182
DNA binding
89
Transcription
14
DNA methylation
3
DNA accessibility
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
35
control
23
transcription factor
2
RNA binding protein
Date released
545
February, 2021
282
August, 2017
238
October, 2019
229
August, 2021
193
May, 2020
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
25
February, 2020
23
October, 2017
19
April, 2020
17
November, 2018
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
180
fastq
177
bigWig
175
bam
89
tsv
65
bed narrowPeak
59
tagAlign
28
bed bed3+
26
bed broadPeak
21
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
281
Homo sapiens
Biosample type
288
tissue
67
in vitro differentiated cells
62
primary cell
Organ
152
pancreas
57
adipose tissue
57
connective tissue
53
liver
26
musculature of body
Project
288
AMP
Genome assembly (visualization)
181
hg19
159
GRCh38
Lab
288
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
288 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
48
89
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
14
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