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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
12
histone
12
histone modification
8
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
12
November, 2017
3
October, 2017
Available data
211
bam
190
bigWig
171
bed narrowPeak
118
tagAlign
95
bigBed narrowPeak
26
tsv
19
fastq
15
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
9
tissue
6
primary cell
Organ
58
liver
15
brain
pancreas
13
musculature of body
6
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
15
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
2
missing controlled_by
assay_title!
DNase-seq
organ_slims!
pancreas
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
tissue
brain
3
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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