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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ATAC-seq
22
ChIP-seq
Assay category
63
DNA accessibility
22
DNA binding
Target of assay
22
histone
22
histone modification
12
broad histone mark
10
narrow histone mark
Date released
63
February, 2023
20
August, 2017
1
April, 2019
1
November, 2017
Available data
bam
2650
bigWig
1488
tsv
1334
bed narrowPeak
1151
fastq
833
bigBed narrowPeak
314
tagAlign
114
bed broadPeak
95
txt
79
bigBed broadPeak
65
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
18
bedpe bed3+
16
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
Organism
85
Homo sapiens
Biosample type
85
tissue
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
27
eye
13
musculature of body
12
epithelium
6
pancreas
2
adipose tissue
2
connective tissue
1
brain
Project
85
AMP
Genome assembly (visualization)
50
hg19
35
GRCh38
Lab
85
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
30
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
assay_title!
DNase-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
coronary artery
35
retina
15
skeletal muscle tissue
13
pigmented layer of retina
12
islet of Langerhans
6
+ See 4 more…
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