Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
47
transcription factor
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
57
November, 2017
August, 2017
2
October, 2019
Available data
2810
bam
2594
bigWig
1511
tsv
1372
bed narrowPeak
981
fastq
704
bigBed narrowPeak
313
tagAlign
161
txt
153
zippedFastqFolder
70
bed broadPeak
64
xls
59
bigBed broadPeak
36
bed bed3+
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
59
Homo sapiens
Biosample type
54
cell line
5
primary cell
Organ
54
liver
4
epithelium
4
vasculature
3
blood vessel
3
brain
2
vein
Project
59
AMP
Genome assembly (visualization)
59
hg19
44
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
11
inconsistent control read length
assay_title!
DNase-seq
month_released!
August, 2017
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
54
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
Download