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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
DNase-seq
1
FAIRE-seq
Assay category
69
DNA binding
1
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
29
October, 2019
2
November, 2017
Available data
171
bam
141
bigWig
120
bed narrowPeak
70
bigBed narrowPeak
68
tsv
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
3
hic
2
bed bed3+
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
70
Homo sapiens
Biosample type
57
tissue
13
primary cell
Organ
353
liver
95
brain
83
pancreas
72
vasculature
70
blood vessel
64
heart
59
epithelium
54
blood
bodily fluid
48
limb
25
kidney
24
nerve
21
artery
19
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
70
AMP
Genome assembly (visualization)
70
hg19
69
GRCh38
Lab
70
AMP-T2D consortium
assay_title!
DNase-seq
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
FAIRE-seq
tissue
tibial artery
18
ascending aorta
13
thoracic aorta
12
aorta
11
coronary artery
3
primary cell
endothelial cell of umbilical vein
10
1
brain microvascular endothelial cell
2
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