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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
DNase-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
50
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
50
histone
50
histone modification
34
broad histone mark
control
16
narrow histone mark
Date released
50
October, 2019
6
February, 2021
6
May, 2019
5
July, 2019
3
February, 2020
Available data
61
bam
56
bed narrowPeak
55
bigWig
48
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
70
Homo sapiens
Biosample type
70
tissue
Organ
880
pancreas
640
connective tissue
627
liver
475
epithelium
465
adipose tissue
343
heart
261
kidney
223
brain
203
vasculature
200
blood vessel
159
bone element
128
artery
69
limb
57
musculature of body
56
eye
51
blood
51
bodily fluid
30
embryo
30
nerve
20
lung
18
vein
16
skeleton
11
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
70
AMP-T2D consortium
assay_title!
DNase-seq
month_released!
November, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
24
1
5
tibial artery
18
1
1
muscle of leg
6
1
gastrocnemius medialis
1
4
islet of Langerhans
2
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