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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
51
ChIP-seq
9
WGBS
6
RRBS
5
ATAC-seq
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
51
DNA binding
15
DNA methylation
6
DNA accessibility
Target of assay
199
histone modification
histone
109
broad histone mark
88
narrow histone mark
50
control
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
710
February, 2021
314
May, 2020
288
August, 2021
243
May, 2021
205
February, 2023
200
May, 2022
168
July, 2018
161
August, 2017
108
July, 2019
101
October, 2019
74
November, 2017
61
March, 2020
59
September, 2020
50
November, 2019
49
April, 2018
47
September, 2023
41
September, 2018
31
October, 2018
25
February, 2020
23
February, 2018
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
14
April, 2019
11
October, 2017
11
September, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
135
fastq
129
bam
99
bigWig
89
tsv
11
tagAlign
7
bed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
bigBed narrowPeak
2
bed bed3+
Organism
160
Homo sapiens
Biosample type
136
tissue
17
primary cell
8
in vitro differentiated cells
Organ
114
pancreas
21
connective tissue
17
liver
15
epithelium
13
adipose tissue
7
musculature of body
Project
161
AMP
Genome assembly (visualization)
103
hg19
99
GRCh38
Lab
161
AMP-T2D consortium
assay_title!
DNase-seq
target.investigated_as!
histone
transcription factor
BIOSAMPLE
ASSAY
161 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
RRBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
89
7
1
liver
12
3
1
subcutaneous abdominal adipose tissue
5
3
skeletal muscle tissue
3
4
adipose tissue
1
3
+ See 3 more…
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
skeletal muscle myoblast
1
1
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
8
See all biosamples
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