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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
11
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
42
Transcription
13
DNA accessibility
Date released
157
July, 2018
121
August, 2017
104
May, 2022
59
May, 2021
56
February, 2023
45
November, 2019
40
September, 2018
39
April, 2018
32
February, 2021
23
October, 2018
19
September, 2020
11
March, 2020
11
September, 2017
10
November, 2020
10
October, 2019
8
January, 2021
7
August, 2020
6
July, 2019
5
March, 2019
5
November, 2018
5
October, 2017
4
August, 2021
3
August, 2018
3
October, 2022
1
August, 2022
1
February, 2020
1
June, 2018
1
May, 2019
Available data
37
fastq
Organism
55
Homo sapiens
Biosample type
37
primary cell
18
tissue
1
cell line
Organ
56
pancreas
52
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
37
HPAP
18
T1D
1
AMP
Lab
37
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
1
AMP-T2D consortium
assay_title!
DNase-seq
organ_slims!
bone marrow
target.investigated_as!
histone
BIOSAMPLE
ASSAY
56 results
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total RNA-seq
ATAC-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
11
2
cell line
EndoC_BH1
1
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