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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
38
ATAC-seq
8
DNase-seq
6
total RNA-seq
1
WGBS
Assay category
69
DNA binding
46
DNA accessibility
6
Transcription
1
DNA methylation
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
35
February, 2023
33
October, 2019
8
July, 2019
4
June, 2019
2
November, 2017
1
March, 2020
Available data
115
bed narrowPeak
87
bam
87
bigWig
77
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
8
bed bed3+
6
tsv
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
122
Homo sapiens
Biosample type
105
tissue
cell line
17
primary cell
Organ
580
pancreas
566
connective tissue
424
adipose tissue
263
liver
245
epithelium
217
brain
202
heart
kidney
127
vasculature
123
blood vessel
96
limb
66
bone element
64
artery
53
musculature of body
31
nerve
21
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
122
AMP
Genome assembly (visualization)
122
GRCh38
94
hg19
Lab
122
AMP-T2D consortium
assay_title!
FAIRE-seq
biosample_type!
cell line
organ_slims!
kidney
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
WGBS
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
1
thoracic aorta
12
1
2
aorta
11
1
1
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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