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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
45
ATAC-seq
25
ChIP-seq
22
DNase-seq
Assay category
67
DNA accessibility
53
Transcription
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
20
June, 2019
3
May, 2019
2
July, 2019
Available data
110
bam
102
bigWig
92
bed narrowPeak
53
tsv
43
bigBed narrowPeak
22
bed bed3+
22
bed broadPeak
22
bigBed broadPeak
4
tagAlign
Organism
145
Homo sapiens
Biosample type
80
tissue
64
cell line
1
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
145
AMP
Genome assembly (visualization)
145
GRCh38
110
hg19
Lab
145
AMP-T2D consortium
assay_title!
FAIRE-seq
organ_slims!
epithelium
BIOSAMPLE
ASSAY
145 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
18
2
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
cell line
smooth muscle cell of the coronary artery
52
8
4
primary cell
smooth muscle cell of the coronary artery
1
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