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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
snATAC-seq
Assay category
4
DNA accessibility
Date released
3
February, 2023
1
May, 2022
Available data
2980
bigWig
2954
bam
1558
bed narrowPeak
1398
tsv
1006
fastq
932
bigBed narrowPeak
296
bed broadPeak
260
bigBed broadPeak
248
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
8
bed bed3
7
bed bedgraph
5
hdf5
4
txt
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
tissue
Organ
1
musculature of body
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_title!
FAIRE-seq
organ_slims!
nerve
skeleton
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
snATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
skeletal muscle tissue
1
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