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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
STARR-seq
1
pCHi-C
Assay category
4
Transcription
1
DNA accessibility
Target of assay
3
control
3
nucleotide modification
Date released
6
November, 2020
4
May, 2020
1
August, 2021
1
February, 2023
1
May, 2021
Available data
5
bigWig
4
bam
4
tsv
1
bed bedgraph
1
bed narrowPeak
1
txt
Organism
13
Homo sapiens
Biosample type
7
cell line
5
primary cell
1
in vitro differentiated cells
Organ
6
epithelium
6
pancreas
Project
8
AMP
5
T1D
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
1
Struan F.A. Grant, CHOP
Audit category:
30
audit script error
13
inconsistent ontology term
assay_title!
FAIRE-seq
lab.title!
AMP-T2D consortium
month_released!
April, 2020
organ_slims!
nerve
BIOSAMPLE
ASSAY
13 results
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MeRIP-seq
total RNA-seq
ATAC-seq
STARR-seq
pCHi-C
cell line
EndoC_BH1
6
Synthesized DNA
1
primary cell
naive B cel
2
1
central memory CD8-positive, alpha-beta T cell
2
in vitro differentiated cells
neuron cell of Hypothalamus (neuron)
1
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