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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
294
ChIP-seq
Assay category
294
DNA binding
Target of assay
226
transcription factor
65
histone
65
histone modification
65
recombinant protein
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
294
November, 2017
210
June, 2019
188
October, 2019
133
May, 2021
125
August, 2017
106
August, 2021
97
May, 2019
67
November, 2018
65
April, 2019
65
February, 2023
61
December, 2017
46
September, 2018
44
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
14
February, 2018
12
October, 2017
5
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
294
Homo sapiens
Biosample type
230
cell line
58
tissue
6
primary cell
Organ
230
liver
64
brain
4
epithelium
4
vasculature
2
blood vessel
Project
294
AMP
Genome assembly (visualization)
263
GRCh38
240
hg19
Lab
294
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
assay_title!
FAIRE-seq
audit.WARNING.category!
inconsistent control read length
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
294 results
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Clear Filters
ChIP-seq
cell line
HepG2
230
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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