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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
ChIP-seq
Assay category
330
DNA binding
Target of assay
236
transcription factor
75
histone
75
histone modification
66
recombinant protein
45
broad histone mark
33
RNA binding protein
30
narrow histone mark
16
control
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
330
November, 2017
303
May, 2021
270
August, 2017
260
May, 2020
210
June, 2019
206
October, 2019
164
July, 2018
97
May, 2019
83
July, 2019
75
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
February, 2023
3
June, 2018
3
September, 2020
Available data
388
bam
330
bigWig
320
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
330
Homo sapiens
Biosample type
264
cell line
57
tissue
9
primary cell
Organ
264
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
330
AMP
Genome assembly (visualization)
277
GRCh38
277
hg19
Lab
330
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
21
inconsistent control read length
inconsistent control run_type
assay_title!
FAIRE-seq
audit.WARNING.category!
inconsistent control run_type
month_released!
February, 2023
BIOSAMPLE
ASSAY
330 results
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Clear Filters
ChIP-seq
cell line
HepG2
264
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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