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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
Assay category
120
DNA binding
Target of assay
109
histone
109
histone modification
57
broad histone mark
52
narrow histone mark
6
control
5
transcription factor
Date released
84
May, 2021
12
August, 2017
12
November, 2017
8
February, 2021
4
August, 2021
Available data
1193
bam
1137
bigWig
840
fastq
700
bed narrowPeak
463
bigBed narrowPeak
393
tsv
153
zippedFastqFolder
120
tagAlign
108
bed broadPeak
108
bigBed broadPeak
43
bed bed3+
11
bed bedMethyl
11
bigBed bedMethyl
8
hic
6
bedpe bed3+
5
hdf5
3
cool
3
tar
2
bed bed3
2
csv
1
txt
1
vcf
Organism
120
Homo sapiens
Biosample type
tissue
100
primary cell
in vitro differentiated cells
20
cell line
Organ
16
liver
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
Project
84
T1D
36
AMP
Genome assembly (visualization)
116
hg19
112
GRCh38
Lab
84
Kyle Gaulton, UCSD
36
AMP-T2D consortium
Audit category:
11
inconsistent control read length
1
inconsistent assembly
assay_title!
FAIRE-seq
biosample_type!
in vitro differentiated cells
tissue
month_released!
April, 2020
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
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