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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ChIP-seq
Assay category
100
DNA binding
Target of assay
338
transcription factor
107
control
100
histone modification
99
histone
82
recombinant protein
58
RNA binding protein
58
narrow histone mark
41
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
5
October, 2019
3
August, 2021
Available data
80
bigWig
78
bed narrowPeak
77
bam
55
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
Organism
100
Homo sapiens
Biosample type
70
tissue
18
cell line
12
in vitro differentiated cells
primary cell
Organ
184
brain
100
liver
95
heart
93
pancreas
70
connective tissue
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
27
epithelium
25
musculature of body
24
nerve
20
artery
20
kidney
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
100
AMP
Genome assembly (visualization)
80
hg19
67
GRCh38
Lab
97
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
assay_title!
FAIRE-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
100 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
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