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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
Assay category
112
DNA binding
Target of assay
216
histone
216
histone modification
112
broad histone mark
104
narrow histone mark
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
64
May, 2021
17
September, 2018
12
August, 2017
8
June, 2019
8
October, 2019
2
May, 2019
1
August, 2021
Available data
118
bigWig
112
bed narrowPeak
100
bam
51
tagAlign
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
112
Homo sapiens
Biosample type
253
tissue
112
primary cell
37
in vitro differentiated cells
17
cell line
1
stem cell
Organ
27
epithelium
23
pancreas
5
blood vessel
5
kidney
5
vasculature
5
vein
4
connective tissue
4
musculature of body
1
liver
Project
68
AMP
44
T1D
Genome assembly (visualization)
112
hg19
92
GRCh38
Lab
64
Kyle Gaulton, UCSD
48
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
1
inconsistent assembly
assay_title!
FAIRE-seq
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
112 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
7
pancreatic ductal cell
6
skeletal muscle myoblast
6
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