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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
3
single cell RNA-seq
Assay category
31
DNA binding
3
Transcription
Target of assay
236
histone
236
histone modification
122
broad histone mark
114
narrow histone mark
34
control
9
RNA binding protein
9
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
7
June, 2019
3
July, 2019
3
May, 2021
3
November, 2017
3
October, 2019
1
August, 2021
1
May, 2019
Available data
31
bam
16
fastq
10
bigWig
3
tsv
2
tagAlign
Organism
34
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
34
primary cell
1
stem cell
Organ
21
epithelium
12
pancreas
6
brain
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
eye
1
liver
Project
34
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
31
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
assay_title!
FAIRE-seq
organ_slims!
bone marrow
eye
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
cerebellar granule cell
2
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