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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
8
DNA accessibility
Date released
545
February, 2021
283
August, 2017
242
October, 2019
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
99
August, 2021
82
November, 2017
80
April, 2019
77
February, 2023
75
July, 2019
74
October, 2018
48
December, 2017
40
March, 2020
40
November, 2019
38
May, 2021
25
February, 2020
25
November, 2018
22
October, 2017
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
November, 2020
3
December, 2019
2
January, 2018
2
May, 2022
1
August, 2022
1
May, 2023
Available data
452
bam
452
tsv
444
bigWig
89
txt
8
bed narrowPeak
6
csv
Organism
545
Homo sapiens
Biosample type
545
tissue
96
cell line
26
in vitro differentiated cells
3
primary cell
Organ
444
connective tissue
386
adipose tissue
150
bone element
8
kidney
8
skeleton
6
limb
1
liver
Project
545
AMP
Genome assembly (visualization)
452
GRCh38
452
hg19
Lab
545
AMP-T2D consortium
0
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
84
inconsistent ontology term
5
audit script error
assay_title!
FAIRE-seq
BIOSAMPLE
ASSAY
545 results
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total RNA-seq
RNA microarray
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
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