Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
Hi-C
2
pCHi-C
FAIRE-seq
Assay category
15
DNA binding
2
3D chromatin structure
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
2
control
Date released
16
October, 2019
3
March, 2020
Available data
19
bam
14
bigWig
12
bed narrowPeak
12
bigBed narrowPeak
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
2
tsv
1
bedpe bed3+
Organism
19
Homo sapiens
Biosample type
17
primary cell
2
tissue
Organ
923
pancreas
728
liver
674
connective tissue
501
epithelium
488
adipose tissue
363
heart
275
kidney
238
brain
218
vasculature
216
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
17
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
FAIRE-seq
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
15
2
tissue
sigmoid colon
1
small intestine
1
Download