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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
DNase-seq
64
ATAC-seq
Assay category
142
DNA accessibility
Date released
78
June, 2019
64
August, 2021
Available data
182
bed narrowPeak
143
bam
130
bigWig
103
bigBed narrowPeak
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
62
txt
24
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
142
Homo sapiens
Biosample type
132
tissue
10
primary cell
Organ
142
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
142
AMP
Genome assembly (visualization)
142
GRCh38
71
hg19
Lab
78
AMP-T2D consortium
64
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
assay_title!
FAIRE-seq
BIOSAMPLE
ASSAY
142 results
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DNase-seq
ATAC-seq
tissue
kidney
13
64
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney capillary endothelial cell
1
+ See 3 more…
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