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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
50
ATAC-seq
11
DNase-seq
FAIRE-seq
Assay category
80
DNA binding
61
DNA accessibility
Target of assay
67
histone
67
histone modification
41
broad histone mark
26
narrow histone mark
13
transcription factor
9
RNA binding protein
Date released
39
May, 2019
36
February, 2023
33
October, 2019
12
February, 2021
6
June, 2019
5
October, 2018
3
August, 2017
2
July, 2019
2
November, 2017
1
November, 2018
1
November, 2019
1
October, 2017
Available data
621
bam
574
bigWig
469
tsv
141
bed narrowPeak
88
bigBed narrowPeak
47
fastq
17
bed bed3+
16
bed broadPeak
15
bigBed broadPeak
14
tagAlign
3
bed bedMethyl
3
bedpe bed3+
3
bigBed bedMethyl
3
hic
2
hdf5
Organism
141
Homo sapiens
Biosample type
113
tissue
16
primary cell
12
cell line
Organ
440
liver
212
pancreas
202
brain
191
heart
182
kidney
150
epithelium
132
vasculature
128
blood vessel
92
limb
74
artery
74
connective tissue
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
12
vein
8
bone element
8
skeleton
1
pituitary gland
Project
141
AMP
Genome assembly (visualization)
139
GRCh38
105
hg19
Lab
141
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
FAIRE-seq
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
141 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
+ See 5 more…
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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