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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
ChIP-seq
5
ATAC-seq
4
DNase-seq
FAIRE-seq
Assay category
197
DNA binding
9
DNA accessibility
Target of assay
168
histone modification
167
histone
93
broad histone mark
73
narrow histone mark
29
transcription factor
10
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
188
October, 2019
141
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
72
December, 2017
72
November, 2018
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
5
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
360
bam
336
bigWig
286
fastq
206
bed narrowPeak
105
bigBed narrowPeak
89
tsv
85
tagAlign
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
200
Homo sapiens
Biosample type
130
tissue
43
in vitro differentiated cells
33
primary cell
Organ
48
pancreas
47
heart
46
connective tissue
18
kidney
18
liver
17
epithelium
13
musculature of body
3
adipose tissue
Project
206
AMP
Genome assembly (visualization)
206
hg19
182
GRCh38
Lab
206
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_title!
FAIRE-seq
BIOSAMPLE
ASSAY
206 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
29
islet of Langerhans
18
1
kidney
18
liver
17
skeletal muscle tissue
13
+ See 7 more…
in vitro differentiated cells
adipocyte
42
1
primary cell
skeletal muscle myoblast
14
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
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