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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
pCHi-C
FAIRE-seq
Assay category
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
2
March, 2020
Available data
3364
bam
3150
bigWig
1792
bed narrowPeak
1600
tsv
1339
fastq
1031
bigBed narrowPeak
384
tagAlign
318
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
157
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
Organ
3
liver
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
FAIRE-seq
month_released!
October, 2017
organ_slims!
skeleton
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
pCHi-C
cell line
HepG2
3
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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