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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
8
DNase-seq
7
WGBS
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
399
May, 2021
353
August, 2017
341
May, 2020
321
February, 2021
318
August, 2021
312
October, 2019
217
June, 2019
200
May, 2022
196
February, 2023
168
July, 2018
120
May, 2019
94
December, 2017
94
July, 2019
86
November, 2018
80
April, 2019
73
September, 2018
63
March, 2020
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
86
fastq
85
bam
78
bigWig
71
bed narrowPeak
71
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
86
Homo sapiens
Biosample type
61
cell line
24
tissue
1
primary cell
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
6
pancreas
2
brain
adipose tissue
1
connective tissue
Project
86
AMP
Genome assembly (visualization)
78
GRCh38
69
hg19
Lab
86
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
FAIRE-seq
month_released!
November, 2019
organ_slims!
adipose tissue
skeleton
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
brain
2
pancreas
2
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primary cell
pancreatic cell
1
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