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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
5
histone
5
histone modification
4
transcription factor
3
broad histone mark
2
narrow histone mark
Date released
6
November, 2017
3
October, 2019
Available data
3392
bam
3164
bigWig
1817
bed narrowPeak
1600
tsv
1353
fastq
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
9
Homo sapiens
Biosample type
6
cell line
2
primary cell
1
tissue
Organ
6
liver
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
brain
Project
9
AMP
Genome assembly (visualization)
9
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_title!
GRO-seq
whole genome sequencing assay
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
9 results
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Clear Filters
ChIP-seq
cell line
HepG2
6
primary cell
endothelial cell of umbilical vein
2
tissue
medial globus pallidus
1
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