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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
DNase-seq
1
ATAC-seq
Assay category
24
DNA accessibility
Date released
23
June, 2019
1
March, 2019
Available data
394
bam
345
fastq
219
bed narrowPeak
198
tsv
160
tagAlign
157
txt
153
zippedFastqFolder
148
bigWig
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
24
Homo sapiens
Biosample type
17
tissue
7
primary cell
Organ
10
brain
7
kidney
6
epithelium
3
heart
3
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
24
AMP
Genome assembly (visualization)
hg19
282
GRCh38
Lab
23
AMP-T2D consortium
1
Mark McCarthy, Oxford
assay_title!
GRO-seq
assembly!
hg19
month_released!
April, 2020
BIOSAMPLE
ASSAY
24 results
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DNase-seq
ATAC-seq
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
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primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
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