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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
6
total RNA-seq
Assay category
15
DNA binding
6
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
10
February, 2018
9
December, 2017
August, 2021
2
May, 2021
Available data
21
bam
20
bigWig
19
fastq
14
bed narrowPeak
6
tsv
3
bed bed3+
Organism
21
Homo sapiens
Biosample type
21
in vitro differentiated cells
Organ
658
pancreas
607
liver
585
connective tissue
426
adipose tissue
308
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
128
kidney
96
limb
93
artery
73
musculature of body
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
21
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
assay_title!
GRO-seq
month_released!
August, 2021
organ_slims!
bone element
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
13
4
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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