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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
25
DNA accessibility
20
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
399
May, 2021
326
February, 2021
306
October, 2019
283
August, 2021
273
August, 2017
215
June, 2019
204
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
91
November, 2017
86
July, 2019
80
April, 2019
60
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
34
December, 2018
34
November, 2018
30
December, 2017
25
January, 2019
22
February, 2020
19
April, 2020
18
October, 2017
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
2
January, 2018
1
August, 2022
Available data
58
bam
36
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
39
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
16
epithelium
adipose tissue
1
connective tissue
Project
60
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
GRO-seq
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
adipose tissue
liver
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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