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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
MPRA
Assay category
3
DNA accessibility
Date released
3
February, 2023
1
October, 2022
Available data
1168
bam
1091
bigWig
694
bed narrowPeak
619
fastq
405
bigBed narrowPeak
371
tsv
153
tagAlign
87
bed broadPeak
87
bigBed broadPeak
47
bed bed3+
8
bedpe bed3+
7
bed bed3
7
bed bedgraph
6
hic
5
bed bedMethyl
5
bigBed bedMethyl
4
txt
3
hdf5
3
tar
2
csv
2
ibed
1
vcf
Organism
3
Homo sapiens
Biosample type
tissue
3
in vitro differentiated cells
1
cell line
Project
4
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
GRO-seq
biosample_type!
tissue
lab.title!
Klaus Kaestner, Upenn
organ_slims!
epithelium
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
MPRA
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
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