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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
35
ATAC-seq
25
total RNA-seq
4
Hi-C
4
pCHi-C
1
WGBS
Assay category
45
DNA binding
35
DNA accessibility
25
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
12
control
Date released
62
October, 2019
31
February, 2023
7
May, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
101
bed narrowPeak
91
bam
73
bigWig
67
bigBed narrowPeak
37
bed bed3+
bed broadPeak
37
bigBed broadPeak
11
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
114
Homo sapiens
Biosample type
114
tissue
4
primary cell
Organ
544
connective tissue
485
adipose tissue
485
pancreas
358
liver
286
heart
231
kidney
229
brain
158
bone element
128
blood vessel
128
vasculature
86
limb
artery
53
eye
41
nerve
37
musculature of body
24
spleen
20
lung
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
114
AMP
Genome assembly (visualization)
68
hg19
41
GRCh38
Lab
114
AMP-T2D consortium
assay_title!
GRO-seq
files.file_type!
bed broadPeak
organ_slims!
artery
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
WGBS
tissue
tibial nerve
35
1
5
islet of Langerhans
3
1
14
4
retina
15
3
pigmented layer of retina
12
2
muscle of leg
7
1
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