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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
5
February, 2023
1
February, 2021
Available data
2594
bam
2286
bigWig
1470
bed narrowPeak
1057
fastq
1014
bigBed narrowPeak
1010
tsv
310
bed broadPeak
292
tagAlign
276
bigBed broadPeak
244
bed bed3+
95
txt
33
bed bedMethyl
33
bigBed bedMethyl
17
bedpe bed3+
16
hic
8
csv
6
bed bed3
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Organ
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
GRO-seq
lab.title!
Maike Sander, UCSD
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
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