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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
145
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
715
February, 2021
368
November, 2017
308
August, 2021
304
August, 2017
269
May, 2020
182
February, 2023
174
May, 2022
173
October, 2019
168
July, 2018
168
June, 2019
160
May, 2021
98
July, 2019
88
November, 2018
81
May, 2019
78
December, 2017
65
October, 2018
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
56
March, 2020
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
23
February, 2020
21
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
2
January, 2018
1
August, 2022
Available data
211
bam
188
bigWig
144
tsv
23
tagAlign
Organism
269
Homo sapiens
Biosample type
166
tissue
102
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
Genome assembly (visualization)
188
hg19
143
GRCh38
Lab
269
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_title!
GRO-seq
lab.title!
Kyle Gaulton, UCSD
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
269 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
HepG2
1
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