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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
4
Transcription
2
DNA accessibility
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
August, 2021
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
6
bam
5
bigWig
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
in vitro differentiated cells
Organ
13
pancreas
9
epithelium
7
connective tissue
1
adipose tissue
Project
7
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
7
AMP-T2D consortium
assay_title!
GRO-seq
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
7 results
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total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
primary cell
osteoblast
4
1
1
in vitro differentiated cells
white fat cell
1
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